Sherif Morgan

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Cell Line Drama

June 13, 2007 By Sherif Morgan Leave a Comment

In basic science lab research, many scientists use cells to study a particular disease. For example, since my project deals with understanding some of the molecular mechanisms of colon cancer, I utilize different colon cancer cell lines (such as SW480, HCT116, HT29, etc).

While a cell line should be the same whether it’s in a lab in California or whether it is in NY, I have always had this suspicion that a cell line could be different in two different labs. Why? Well, cells can condition themselves to the environment in which they are growing, and since they are cancer cells, they tend to accumulate random mutations the older they get.

Clearly this would pose a huge problem… a lab can publish an article listing their observations in HT29, which would contradict another lab’s published work in the same cell line. Both observations, even though contradictory, may be accurate.

The above-stated thoughts were not based on hard data, so they were mere gut feelings. This suspicion, however, was unfortunately confirmed in my last PhD committee meeting, when I showed results in HT29 that was contradictory to previously published work. At first, my committee questioned my results…

It turns out, there are two different strains of HT29. While I was glad to learn that my work was accurate, I was saddened, because my fear was confirmed… some results in the lab could be simply artifacts of the the system.

Simple and logical assumptions (assuming that a cell line should be the same) can cause a lot of drama and lost time. It seems rather daunting and overwhelming when the implication here is that scientists need to critically analyze everything… especially when they are pondering complex systems, such as cancer or a cell line.

Filed Under: Grad School, Science

Last Committee Meeting

May 29, 2007 By Sherif Morgan Leave a Comment

Last Thursday (May 24th) I had a PhD committee meeting. It went great. I got awesome suggestions and critiques from my committee members… however, these meetings can be visually depicted by the following comic.

phd020507s1.gif

The only difference is that a committee meeting has 5 fire-hydrant hoses instead of just one.

Filed Under: Grad School, Science

Reporting Science News

May 10, 2007 By Sherif Morgan Leave a Comment

As a scientist, sometimes I cringe when I read reports in the mainstream media about scientific discoveries. Since the news reporter has to make it to-the-point and catchy, a lot of the science is lost… this, oftentimes, leads to inaccurate reporting. For example, what would you think if you read this headline:

“A New Drug Kills Cancer Cells”

Well, the headline suggests that a cancer cure has been found. Sounds Great, Right? The problem is that the message the reader takes from the headline is probably very different from the actual discovery, because the headline neglects at least two hugely important questions:

a) Which Cancer cells?

There a ton of different types of cancer… even within a type of cancer, let’s say colon cancer, there are many different reasons why colon cancer occur, and based on the stage and genetics of a tumor and the individual, drug A could work beautifully for patient 1 yet does absolutely nothing for patient 2.

b) How are the studies performed?

In labs around the world, every day scientists use compounds to kill cancer cells that grow on plastic dishes. This does not mean that these compounds are effective cancer therapies. At this point, these compounds are about 10 years of animal and clinical studies before they enter the marketplace.

Even the news stories, which provide more details, lack a certain level of depth that would capture the whole picture, which is probably necessary since the average person would not understand/not care about all the important technical details.

It is a double-edge sword, really. People would like to see the progress that the biomedical science field produces, but in order to communicate these stories to the average person, the result sometimes is the wrong or misleading message.

Filed Under: Science

Can Grad Students Be Impact Players?

May 5, 2007 By Sherif Morgan Leave a Comment

When I first started grad school, I was somewhat intimidated by professors, who are well-established and successful scientists in their fields. I read their publications, learned from them quite a bit. For a good reason, I felt a huge chasm between their tremendous knowledge and experiences and me, as a budding scientist.

As I progressed in my research, and the idea of publishing an article in a peer-reviewed journal emerged, I began to think…

My journal article will present my research to the whole scientific community, which includes other professors and scientists across the U.S. and the world. They will read my paper and some will use it as a building block for their research or knowledge.

Wow.

While as a graduate student, I have much to learn, I no longer have to be a bystander or an observer in science, I can be an “impact player”.

Filed Under: Grad School, Science

Being An Impact Player

May 4, 2007 By Sherif Morgan Leave a Comment

It is quite an amazing feeling when you come up with a novel idea, then you realize that a successful established company is pursuing the same idea. While it may sound discouraging or you may feel “scooped”, I think it is very rewarding when you feel that you came up with the same idea… or that the idea you generated is of the same caliber as an idea generated by successful industry leaders.

Which makes me think… there are two kinds of people: innocent bystanders/observers and there are impact players. Impact players do things, come up with ideas, start new ventures that others (bystanders/observers) read about. Generally speaking, entrepreneurs are impact players, because they try to capitalize on (their) existing knowledge to develop a new context, market, product, or service.

Are you an impact player? Do you act like one?

Filed Under: Business, Grad School, Leadership, Science

Competition Is Good!

May 4, 2007 By Sherif Morgan Leave a Comment

I am almost done with my third year of my PhD program. Even though I am done with my courses, I decided to take a class titled “Entrepreneurship For Scientists”, which is a seminar style where every week a speaker (entrepreneur, CEO, or industry leader) comes in to present. As part of the class, we had to work in groups of 4 throughout the semester and write a business plan for a company that revolves around a science-based innovation.

My group decided to design a genetic test that would identify an individual’s risk of developing heart disease. We worked hard throughout the semester to research the validity of the science, but mainly focusing on the market research, the technologies we would use, and how the process would work. According to our conservative projections, in year 5, we would be generating a profit of $25M.

We gave a 15 minute talk on Wednesday (May 2nd) to an audience of business leaders, VCs, and angels. It was very well received. Even though it was an academic exercise, our group is toying with the idea of launching.

Anyway, the day after our presentation (Thursday, May 3rd), Brian Williams in the NBC Nightly News reports that scientists have discovered a DNA mutation that can predispose individuals of a higher risk of heart attacks. In addition, there was an article published in MSNBC.com, which indicates that a company are pursuing developing a test that identifies people risk of heart disease.

While at first, I thought that we got “scooped” – I began to think back to our presentation, particularly the part where we mentioned that we welcome competition. Since this is a huge market, another company that would be raising awareness for our market is definitely a good thing. It can be of particular benefit if the competition is well-established, because the smaller company can piggy-back on the wave of marketing and raised awareness that the established company generates. On the other hand, it may become detrimental, since the established company can outdo the smaller company at everything they try to excel. There is a fine and strategic line that needs to be planned to capitalize on the efforts done by the established company, without arousing their “threat sensors”.

Our goal, if we launch, then is to excel and beat our competition by either the quality of our test and process, cost, or a combination, so we would gain a larger market share. Indeed, the price we set for our kit is much lower than our competition, and our test is more scientifically robust.

Now, the $25 million question is… Should We Launch?

Filed Under: Business, Science

Meeting Alfred Knudson

April 25, 2007 By Sherif Morgan Leave a Comment

I have had the pleasure of having dinner last Thursday evening and lunch last Friday with Alfred Knudson. In addition to the Wikipedia link on my last blog entry, you can read a more detailed description of his career here. He is most famous for formulating the “two-hit” theory, which identified a distinct difference between hereditary versus sporadic cancer, and suggested the presence of “tumor-suppressor” genes.

Beyond a doubt, he is an excellent scientist. What struck me the most, however, while I had dinner and lunch with him is how personable, respectable, and considerate he was. He listened to the graduate students as experts in their fields… he asked questions of the graduate students with the expectation to learn something new.

I was one of the few people who had both dinner and lunch with him, and I must have made an impression on him… after lunch, when he was about to leave for his next appointment, he turned around and made sure he shook my hands before he left. That meant a lot to me.

In addition to being an excellent scientist, Alfred Knudson is a wonderful human being.

Filed Under: Grad School, Science

Wow!

April 21, 2007 By Sherif Morgan Leave a Comment

I had a pretty unique couple of days. On Thursday (April 19) and Friday (April 20), I met two very incredible, world-renowned individuals:

– Alfred Knudson. We had dinner on Thursday and lunch on Friday.

– Karl Eller. Had an intimate breakfast on Friday morning.

In the next day or two, I will add more blog entries to talk about my experiences talking with these amazing individuals.

Filed Under: Business, Grad School, Science

more to life than academia?

April 19, 2007 By Sherif Morgan Leave a Comment

When a graduate student is pursuing a PhD in a science field (I am not sure if this is universal among other fields), the student’s advisor has traditionally expected the student to pursue an academic career. Why? I am not exactly sure, but perhaps, faculty members view the curiosity and pursuit of scientific knowledge (exemplified in an academic environment) would be superior to any other career choice. Maybe it is a completely different reason.

Nowadays, however, I feel that faculty members are more open to the idea that their students would pursue other career choices. What has led to that shift? I don’t know, but I can speculate… perhaps, it is the lack of funding to academic labs, or maybe it is the result of a progressive mindset that has been spreading in the academic hallways… there is more to life than academia.

For a long time now I have known that my future would not entail lab research. I love research, I think it is fascinating… but I do not particularly enjoy the context at which research is conducted. I have known for some time now that my plan is to generate income through web-based businesses and dedicate my time to develop a personally funded non-profit organization that will address some of the problems that turn me off to academic research.

Even though faculty members, as I mentioned, are more open-minded… I am still cautious about openly sharing my future dreams and goals.

If you are a graduate student in a science field and desire to pursue alternative careers in science, please get in touch with me, and let’s bounce some ideas off of each other.

You can learn more about my vision through my digital resume.

Filed Under: Grad School, Science

Entrepreneurial Faculty: Good or Bad?

April 12, 2007 By Sherif Morgan Leave a Comment

Traditionally, the purpose of research at the university was to seek knowledge for the purpose of knowledge, which has, in my opinion, created a disconnect between research conducted in academia and the general public.

In recent years, especially in the biomedical field, there has been a spike in the number of companies that are based on the research of university faculty members. While some may conclude that the focus of these faculty members has shifted from pursuit of knowledge to making money, I believe that these faculty members are carrying out their mission of improving the quality of life of people. Sure, if these companies become successful the faculty will likely receive monetary rewards, but there is nothing wrong with that. After all, these faculty members will probably be working double duty; they will fulfill the requirements of their academic appointment and starting a company simultaneously.

In addition, starting a company based on academic research is associated with a tremendous amount of risk. In the case of drug discovery, for example, faculty generally conduct their screening in cell-based assays to identify lead compounds. The most promising lead compounds, then, are tested in animals (pre-clinical studies), which can usually be conduced at the university. The transition into phases I, II, and III clinical in humans, however, can be quite costly, and will require funding from venture or corporate partners. At that point, there is still absolutely no guarantee that these compounds will be successful in treating the disease in question.

While it is important to encourage the entrepreneurial spirit of faculty members, they need to be careful when thinking about starting a company, first, because of the amount of risk associated with it, and also because it can easily consume and exhaust their energy and resources, which may eventually negatively affect their academic research.

Filed Under: Entrepreneur, Grad School, Science

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